| Home> Library > Digital Databases > NCBI Entrez Databases |
|
printable version |
email this page
|
|
Library
|
|
|
National Center for Biotechnology Information (NCBI) Entrez Databases
Entrez, The Life Sciences Search Engine | The new Entrez cross-database search page |
|---|
Entrez Gene | Provides a unified query environment for genes defined by sequence and/or in NCBI's Map Viewer | Entrez Genome | Provides views for a variety of genomes, complete chromosomes, sequence maps with contigs, and integrated genetic and physical maps | Entrez Nucleotide | Contains sequence data from GenBank, EMBL, and DDBJ, the members of the tripartite, international collaboration of sequence databases | Entrez PopSet | Contains aligned sequences submitted as a set resulting from a population, phylogenetic, or mutation study These alignments describe such events as evolution and population variation. The PopSet database contains both nucleotide and protein sequence data. | Entrez Protein | Contains sequence data from the translated coding regions from DNA sequences in GenBank, EMBL, and DDBJ as well as protein sequences submitted to Protein Information Resource (PIR), SWISS-PROT, Protein Research Foundation (PRF), and Protein Data Bank (PDB) (sequences from solved structures) | Entrez Structure | Also Molecular Modeling Database (MMDB)Contains experimental data from crystallographic and NMR structure determinations The data for MMDB are obtained from the Protein Data Bank (PDB). | Homologene, Discover Homologs | A system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes | NCBI Map Viewer | Supports search and display of genomic information by chromosomal position Regions of interest can be retrieved by text queries (e.g., gene or marker name) or by sequence alignment (BLAST) | OMIM (Online Mendelian Inheritance in Man) | A catalog of human genes and genetic disorders | Single Nucleotide Polymorphism | A central repository database for both single- base nucleotide substitutions and short-deletion and insertion polymorphisms. | Taxonomy Browser | Contains the names of all organisms that are represented in the NCBI genetic database by at least one nucleotide or protein sequence | UniGene: An Organized View of the Transcriptone | An experimental system for automatically partitioning GenBank sequences into a non-redundant set of gene-oriented clusters Each UniGene cluster contains sequences that represent a unique gene, as well as related information such as the tissue types in which the gene has been expressed and map location. |
|
|
|